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Aliases : evm_27.TU.AmTr_v1.0_scaffold00135.24
Description : Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000444_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g023582 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g075200 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g075201 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g30164 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g34361 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g27752 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g02852 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g00252 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene23175.t1 | Aspi01Gene23175 | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0335.g065535 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g02293 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g09234 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.08G028200.1 | Ceric.08G028200 | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G007200.1 | Ceric.30G007200 | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000849.28 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g00261 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10202 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05104 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g10196 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g41769 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g06506 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g46066 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05318 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g19545 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g25382 | PTAC8, TMP14, PSI-P, PSAP | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g28043 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01027036001 | No alias | Protein CURVATURE THYLAKOID 1A, chloroplastic... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01027447001 | PTAC8, TMP14, PSI-P, PSAP | Protein CURVATURE THYLAKOID 1B, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01028749001 | No alias | Protein CURVATURE THYLAKOID 1A, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g28315 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g00229 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g19368 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g21744 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g34028 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g04797 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g04798 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06759 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g40930 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g03415 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g09525 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g27720 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g00176 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g11391 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16623 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19759 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.07 | OrthoFinder output from all 47 species | |
| Pnu_g32750 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10594 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g18345 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005098 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0111.g020672 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g28663 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g011770.4.1 | Solyc10g011770 | Protein CURVATURE THYLAKOID 1A, chloroplastic... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc11g010480.2.1 | Solyc11g010480 | Protein CURVATURE THYLAKOID 1D, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g05035 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06785 | No alias | regulatory factor *(CURT) of thylakoid grana stacking &... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e000193_P001 | Zm00001e000193 | Protein CURVATURE THYLAKOID 1A, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002212_P002 | PTAC8, TMP14,... | Protein CURVATURE THYLAKOID 1B, chloroplastic... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e015912_P002 | Zm00001e015912 | Protein CURVATURE THYLAKOID 1D, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019748_P001 | Zm00001e019748 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e029009_P001 | Zm00001e029009 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | HCCA |
| MF | GO:0004852 | uroporphyrinogen-III synthase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0051205 | protein insertion into membrane | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025564 | CAAD_dom | 113 | 189 |
| No external refs found! |