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  5. AMTR_s00133p00115060

AMTR_s00133p00115060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00133.59

No description available


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00133p00115060
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G75160 No alias Protein of unknown function (DUF620) 0.04 OrthoFinder output from all 47 species
AT1G79420 No alias Protein of unknown function (DUF620) 0.03 OrthoFinder output from all 47 species
AT5G06610 No alias Protein of unknown function (DUF620) 0.03 OrthoFinder output from all 47 species
Adi_g063519 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10862 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11021 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18965 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03158 No alias GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15973 No alias GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g21827 No alias GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g00596 No alias GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03174 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56277.t1 Aspi01Gene56277 GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69938.t1 Aspi01Gene69938 GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0031.g024486 No alias GTPase effector *(BDR) & original description: CDS=183-1394 0.05 OrthoFinder output from all 47 species
Azfi_s0038.g026341 No alias GTPase effector *(BDR) & original description: CDS=255-1508 0.02 OrthoFinder output from all 47 species
Cba_g17398 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g02175 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g02214 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37138 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11719 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02503 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009382001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01009692001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01033432001 No alias Chromatin organisation.histone modifications.histone... 0.06 OrthoFinder output from all 47 species
GSVIVT01036716001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_31528 No alias GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
LOC_Os07g40150.1 LOC_Os07g40150 GTPase effector (BDR) 0.06 OrthoFinder output from all 47 species
LOC_Os10g27110.1 LOC_Os10g27110 GTPase effector (BDR) 0.07 OrthoFinder output from all 47 species
Len_g01245 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17331 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04065 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14366 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19621 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_133920g0010 No alias GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
Msp_g12104 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15164 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01199 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03609 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15972 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19162 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06945 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14757 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03053 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06354 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024239 No alias GTPase effector *(BDR) & original description: CDS=316-1776 0.04 OrthoFinder output from all 47 species
Sam_g19310 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19311 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g078650.4.1 Solyc03g078650 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Solyc04g078190.4.1 Solyc04g078190 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g03708 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09050 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14827 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37614 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44481 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47866 No alias GTPase effector *(BDR) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g52753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010682_P001 Zm00001e010682 GTPase effector (BDR) 0.06 OrthoFinder output from all 47 species
Zm00001e012456_P001 Zm00001e012456 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Zm00001e028997_P004 Zm00001e028997 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Zm00001e035436_P001 Zm00001e035436 GTPase effector (BDR) 0.05 OrthoFinder output from all 47 species
Zm00001e038067_P001 Zm00001e038067 GTPase effector (BDR) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 115 364
No external refs found!