AMTR_s00132p00084290 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00132.22

Description : Solute transport.carrier-mediated transport.APC superfamily.NCS-1 family.nucleobase cation transporter (PLUTO-type)

Gene families : OG0002682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002682_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00132p00084290

Target	Alias	Description	ECC score	Gene Family Method
Ala_g20017	No alias	nucleobase cation transporter *(PLUTO) & original...	0.03	OrthoFinder output from all 47 species
Als_g25765	No alias	nucleobase cation transporter *(PLUTO) & original...	0.03	OrthoFinder output from all 47 species
Aop_g38729	No alias	nucleobase cation transporter *(PLUTO) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g28676	No alias	nucleobase cation transporter *(PLUTO) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g53181	No alias	nucleobase cation transporter *(PLUTO) & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g018995	No alias	nucleobase cation transporter *(PLUTO) & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015205	nucleobase transmembrane transporter activity	IEA	Interproscan
BP	GO:0015851	nucleobase transport	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001248	Pur-cyt_permease	33	479

External Links

No external refs found!