1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00131p00107350

AMTR_s00131p00107350 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00131.76

Description : RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm1 component


Gene families : OG0003066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003066_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00131p00107350

Target Alias Description ECC score Gene Family Method Actions
Cba_g06880 No alias component *(LSm1) of U6-associated LSm accessory... 0.02 OrthoFinder output from all 47 species
Gb_06915 No alias component LSm1 of U6-associated LSm accessory... 0.02 OrthoFinder output from all 47 species
Len_g42920 No alias component *(LSm1) of U6-associated LSm accessory... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 15 80
No external refs found!