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  5. AMTR_s00130p00113100

AMTR_s00130p00113100 (MBF1B, ATMBF1B,...)


Aliases : MBF1B, ATMBF1B, evm_27.TU.AmTr_v1.0_scaffold00130.56

Description : Multiprotein-bridging factor 1b OS=Arabidopsis thaliana


Gene families : OG0001908 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001908_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00130p00113100

Target Alias Description ECC score Gene Family Method Actions
AT2G42680 ATMBF1A, MBF1A multiprotein bridging factor 1A 0.02 OrthoFinder output from all 47 species
Adi_g126306 MBF1C, ATMBF1C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45059 MBF1B, ATMBF1B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13196 MBF1B, ATMBF1B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G003600.1 MBF1B, ATMBF1B,... not classified & original description: pacid=50601855... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.75 ATMBF1A, MBF1A Multiprotein-bridging factor 1a OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre02.g108450 ATMBF1A, MBF1A Multiprotein-bridging factor 1a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g13469 MBF1B, ATMBF1B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08172 MBF1B, ATMBF1B not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014192001 ATMBF1A, MBF1A Multiprotein-bridging factor 1a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os08g27850.1 ATMBF1A, MBF1A,... Multiprotein-bridging factor 1b OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sam_g20333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021543_P003 ATMBF1A, MBF1A,... Multiprotein-bridging factor 1b OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001387 Cro/C1-type_HTH 87 138
IPR013729 MBF1_N 9 79
No external refs found!