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  5. AMTR_s00130p00051210

AMTR_s00130p00051210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00130.20

No description available


Gene families : OG0003847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003847_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00130p00051210
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT4G18810 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g011016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04590 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0183.g056499 No alias not classified & original description: CDS=145-1983 0.06 OrthoFinder output from all 47 species
Cba_g66634 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.38G046400.1 Ceric.38G046400 not classified & original description: pacid=50580541... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000492.83 No alias No description available 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.7 No alias No description available 0.05 OrthoFinder output from all 47 species
Cre01.g027850 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre05.g244800 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g15806 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g01471 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g03794 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01021256001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_08986 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g13970.2 LOC_Os02g13970 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g10953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10045090g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g04615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11057 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03597 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g07605 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g12441 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g13881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo170011 No alias No description available 0.07 OrthoFinder output from all 47 species
Solyc02g072160.4.1 Solyc02g072160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g09147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e024909_P003 Zm00001e024909 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR013857 NADH-UbQ_OxRdtase-assoc_prot30 273 431
No external refs found!