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  5. AMTR_s00126p00106330

AMTR_s00126p00106330 (ATATG2, ATG2,...)


Aliases : ATATG2, ATG2, evm_27.TU.AmTr_v1.0_scaffold00126.49

Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG2 component


Gene families : OG0003168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00126p00106330

Target Alias Description ECC score Gene Family Method Actions
AT3G19190 ATATG2, ATG2 autophagy 2 0.07 OrthoFinder output from all 47 species
Ala_g31161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11381 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Ceric.01G052200.1 ATATG2, ATG2,... component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Cre09.g408950 ATATG2, ATG2 No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01031759001 ATATG2, ATG2 Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.06 OrthoFinder output from all 47 species
LOC_Os06g15700.1 ATATG2, ATG2,... component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
MA_10433793g0030 ATATG2, ATG2 component ATG2 of autophagosome ATG9-2-18 membrane... 0.06 OrthoFinder output from all 47 species
MA_131602g0010 ATATG2, ATG2 component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Msp_g20277 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Nbi_g05017 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008161 ATATG2, ATG2 component *(ATG2) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Solyc01g108160.3.1 ATATG2, ATG2,... component ATG2 of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Zm00001e030944_P001 ATATG2, ATG2,... component ATG2 of autophagosome ATG9-2-18 membrane... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008158 hedgehog receptor activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR015412 Atg2/VPS13_C 1911 2006
IPR026854 VPS13-like_N 20 110
No external refs found!