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  5. AMTR_s00125p00077260

AMTR_s00125p00077260 (ATFH5, Fh5,...)


Aliases : ATFH5, Fh5, evm_27.TU.AmTr_v1.0_scaffold00125.19

Description : Cytoskeleton.microfilament network.actin polymerisation.formin actin filament elongation factor activities.group-I formin


Gene families : OG0001137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00125p00077260
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Adi_g030560 AHF1, FH1, AFH1, ATFH1 group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46728.t1 FH6, ATFH6,... group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Ceric.15G042900.1 FH6, ATFH6,... not classified & original description: pacid=50640104... 0.03 OrthoFinder output from all 47 species
Ehy_g19618 No alias group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01000127001 FH6, ATFH6 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Len_g59609 FH6, ATFH6 group-I formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Pnu_g24377 No alias group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e010517_P001 ATFH5, Fh5,... group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Zm00001e040521_P001 ATFH5, Fh5,... group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR015425 FH2_Formin 455 857
No external refs found!