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  5. AMTR_s00119p00096560

AMTR_s00119p00096560 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00119.75

No description available


Gene families : OG0005172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00119p00096560

Target Alias Description ECC score Gene Family Method Actions
Cba_g00775 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.02 OrthoFinder output from all 47 species
Cre08.g368500 No alias No description available 0.02 OrthoFinder output from all 47 species
Msp_g00441 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.02 OrthoFinder output from all 47 species
Pir_g28976 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.02 OrthoFinder output from all 47 species
Pnu_g08497 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002614 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.02 OrthoFinder output from all 47 species
Spa_g08087 No alias pre-60S ribosomal subunit assembly factor *(NOP15) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 55 121
No external refs found!