AMTR_s00117p00063030 (BGAL9,...)

Aliases : BGAL9, evm_27.TU.AmTr_v1.0_scaffold00117.17

Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase

Gene families : OG0000377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00117p00063030

Target	Alias	Description	ECC score	Gene Family Method
AT1G77410	BGAL16	beta-galactosidase 16	0.03	OrthoFinder output from all 47 species
Aspi01Gene28359.t1	BGAL8, Aspi01Gene28359	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28377.t1	BGAL1, Aspi01Gene28377	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g02616	BGAL1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g78096	BGAL1	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Smo269483	BGAL8	Cell wall.pectin.rhamnogalacturonan I.modification and...	0.03	OrthoFinder output from all 47 species
Zm00001e000496_P002	BGAL3, Zm00001e000496	beta-galactosidase (BGAL)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001944	Glycoside_Hdrlase_35	38	342

External Links

No external refs found!