1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00116p00144040

AMTR_s00116p00144040 (POB1, ATPOB1,...)


Aliases : POB1, ATPOB1, evm_27.TU.AmTr_v1.0_scaffold00116.48

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.BTB/POZ substrate adaptor components.LRB-type component


Gene families : OG0001144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001144_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00116p00144040
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00116p00138800 POB1, ATPOB1,... BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Aev_g01091 POB1, ATPOB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19579 No alias substrate adaptor *(LRB) of CUL3-BTB E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene50668.t1 POB1, ATPOB1,... substrate adaptor *(LRB) of CUL3-BTB E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01027032001 POB1, ATPOB1 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os06g31090.1 POB1, ATPOB1,... BTB/POZ domain-containing protein POB1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011705 BACK 2 67
No external refs found!