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Aliases : evm_27.TU.AmTr_v1.0_scaffold00114.52
Description : Probable F-box protein At2g36090 OS=Arabidopsis thaliana
Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G27310 | No alias | F-box family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G36090 | No alias | F-box family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g022605 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04411 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g33061 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g01481 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g60927 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g03177 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04265 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g01209 | SLY2 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene23959.t1 | SLY1, Aspi01Gene23959 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010412 | SLY1 | not classified & original description: CDS=1-828 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G080600.1 | Ceric.05G080600 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g14808 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g32029 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011119001 | No alias | Probable F-box protein At2g36090 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Gb_08963 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_11568 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g33240.1 | LOC_Os02g33240 | Probable F-box protein At2g36090 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g33820.1 | LOC_Os04g33820 | Probable F-box protein At2g36090 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| MA_119267g0010 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.03 | OrthoFinder output from all 47 species | |
| MA_146085g0010 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.04 | OrthoFinder output from all 47 species | |
| MA_152693g0010 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.04 | OrthoFinder output from all 47 species | |
| MA_164016g0010 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.02 | OrthoFinder output from all 47 species | |
| MA_17981g0010 | SLY1 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_196364g0010 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.07 | OrthoFinder output from all 47 species | |
| MA_9868304g0010 | SLY1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g06600.1 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03590 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g18489 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g26122 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g33760 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g17370 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc07g047680.3.1 | SLY2, Solyc07g047680 | SLY-type gibberellin signal transducer. component F-box... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g068710.3.1 | Solyc11g068710 | Probable F-box protein At2g36090 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03889 | No alias | substrate adaptor of SCF E3 ubiquiTin ligase *(SLY) &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009127_P001 | Zm00001e009127 | Probable F-box protein At2g36090 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014737_P001 | Zm00001e014737 | Probable F-box protein At2g36090 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e022823_P002 | SLY1, Zm00001e022823 | SLY-type gibberellin signal transducer. component F-box... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |