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  5. AMTR_s00111p00125340

AMTR_s00111p00125340 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00111.99

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL19 component


Gene families : OG0002345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00125340
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Aev_g00795 No alias component *(bL19m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ala_g36887 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g28795 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Pp3c24_12530V3.1 Pp3c24_12530 Ribosomal protein L19 family protein 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 93 188
No external refs found!