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  5. AMTR_s00109p00047950

AMTR_s00109p00047950 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.34

Description : Solute transport.carrier-mediated transport.TOC superfamily.TSUP transport protein


Gene families : OG0000909 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000909_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00047950
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0138.g051132 No alias transport protein *(TSUP) & original description: CDS=350-2386 0.03 OrthoFinder output from all 47 species
Cba_g16581 No alias transport protein *(TSUP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g01696 No alias transport protein *(TSUP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035669001 No alias Solute transport.carrier-mediated transport.TOC... 0.03 OrthoFinder output from all 47 species
LOC_Os01g57700.1 LOC_Os01g57700 transport protein (TSUP) 0.02 OrthoFinder output from all 47 species
Ppi_g40093 No alias transport protein *(TSUP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52278 No alias transport protein *(TSUP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo414563 No alias Solute transport.carrier-mediated transport.TOC... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR002781 TM_pro_TauE-like 82 204
IPR002781 TM_pro_TauE-like 264 437
No external refs found!