AMTR_s00107p00013610 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00107.1

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter

Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00107p00013610
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s01529p00010210	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AT1G17840	ATWBC11, ABCG11,...	white-brown complex homolog protein 11	0.08	OrthoFinder output from all 47 species
AT1G51460	No alias	ABC-2 type transporter family protein	0.02	OrthoFinder output from all 47 species
AT1G51500	D3, CER5,...	ABC-2 type transporter family protein	0.07	OrthoFinder output from all 47 species
Adi_g059182	ATWBC11, ABCG11,...	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Adi_g079710	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.1	OrthoFinder output from all 47 species
Adi_g102000	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g05451	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g13702	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g39654	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g42715	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g43358	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g04432	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g06345	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g07441	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene24079.t1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0027.g023711	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=225-2489	0.07	OrthoFinder output from all 47 species
Cba_g13840	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.04G006500.1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.06G041600.1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.1Z228500.1	ATWBC11, ABCG11,...	not classified & original description: pacid=50606281...	0.04	OrthoFinder output from all 47 species
Ceric.39G053900.1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g09105	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g28408	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g46097	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g01516	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g18232	ATWBC11, ABCG11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os04g44610.1	ATWBC11, ABCG11,...	suberin/cutin lipid exporter (DSO). subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
LOC_Os07g18874.1	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Len_g37560	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g40842	ATWBC11, ABCG11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10430884g0010	No alias	ABC transporter G family member 3 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_10436774g0010	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_69480g0010	ATWBC11, ABCG11,...	suberin/cutin lipid exporter (DSO). wax lipid exporter...	0.03	OrthoFinder output from all 47 species
MA_7934311g0010	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Msp_g15327	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.07	OrthoFinder output from all 47 species
Nbi_g03823	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g29313	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g09868	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g16912	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g56463	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g61555	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g14726	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g32849	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g03882	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g16756	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002792	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=1-2232	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019973	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=1-2280	0.03	OrthoFinder output from all 47 species
Smo234186	ATWBC11, ABCG11,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc11g065350.2.1	Solyc11g065350	wax lipid exporter (CER5). subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
Solyc11g065360.2.1	Solyc11g065360	wax lipid exporter (CER5). subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Spa_g08295	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e007450_P001	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Zm00001e027165_P003	D3, CER5,...	wax lipid exporter (CER5). subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	73	200
IPR013525	ABC_2_trans	363	569

External Links

No external refs found!

AMTR_s00107p00013610 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation