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  5. AMTR_s00106p00084420

AMTR_s00106p00084420 (VAP27, VAP27-1,...)


Aliases : VAP27, VAP27-1, (AT)VAP, VAP, evm_27.TU.AmTr_v1.0_scaffold00106.56

Description : Vesicle-associated protein 1-1 OS=Arabidopsis thaliana


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00084420
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Adi_g102804 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Ala_g05641 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Als_g03680 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Lfl_g00566 No alias contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014133 No alias contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Solyc01g090990.3.1 Solyc01g090990 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Spa_g06544 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Spa_g19180 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Zm00001e020953_P001 BSK1, Zm00001e020953 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000535 MSP_dom 7 108
No external refs found!