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  5. AMTR_s00103p00133280

AMTR_s00103p00133280 (ATYSL3, YSL3,...)


Aliases : ATYSL3, YSL3, evm_27.TU.AmTr_v1.0_scaffold00103.82

Description : Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL-type)


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00133280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00045420 ATYSL3, YSL3,... Solute transport.carrier-mediated transport.OPT... 0.02 OrthoFinder output from all 47 species
AT5G53550 ATYSL3, YSL3 YELLOW STRIPE like 3 0.04 OrthoFinder output from all 47 species
Aev_g05443 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Als_g20697 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Als_g22814 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Als_g39810 YSL6 iron chelator transporter *(YSL) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0138.g051069 YSL6 iron chelator transporter *(YSL) & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01012035001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.04 OrthoFinder output from all 47 species
Gb_41263 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
LOC_Os04g32050.1 YSL6, LOC_Os04g32050 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
LOC_Os04g45900.1 ATYSL2, YSL2,... iron chelator transporter (YSL). ferric cation-chelator... 0.05 OrthoFinder output from all 47 species
Len_g41418 YSL6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10431747g0010 YSL7 Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.06 OrthoFinder output from all 47 species
Msp_g13893 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Sam_g16877 No alias iron chelator transporter *(YSL) & original description: none 0.01 OrthoFinder output from all 47 species
Solyc03g031920.3.1 YSL7, Solyc03g031920 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e008357_P001 YSL6, Zm00001e008357 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e023053_P001 YSL7, Zm00001e023053 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e026901_P002 YSL7, Zm00001e026901 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e041266_P002 YSL7, Zm00001e041266 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005231 excitatory extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 26 239
No external refs found!