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  5. AMTR_s00103p00092610

AMTR_s00103p00092610 (SMT1, CPH,...)


Aliases : SMT1, CPH, evm_27.TU.AmTr_v1.0_scaffold00103.50

Description : Lipid metabolism.phytosterols.campesterol synthesis.sterol C-24 methyltransferase


Gene families : OG0000656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000656_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00092610
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Aev_g11693 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ala_g04102 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ala_g08847 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aop_g00624 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene43848.t1 SMT1, CPH,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000430.47 SMT2, FRL1, CVP1 Enzyme classification.EC_2 transferases.EC_2.1... 0.01 OrthoFinder output from all 47 species
Dac_g25896 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ore_g05808 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ore_g43889 SMT2, FRL1, CVP1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ppi_g13815 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 96 176
No external refs found!