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  5. AMTR_s00100p00119160

AMTR_s00100p00119160 (UPL3, KAK,...)


Aliases : UPL3, KAK, evm_27.TU.AmTr_v1.0_scaffold00100.38

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase


Gene families : OG0001729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001729_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00100p00119160

Target Alias Description ECC score Gene Family Method Actions
AT4G38600 UPL3, KAK HEAT repeat ;HECT-domain (ubiquitin-transferase) 0.09 OrthoFinder output from all 47 species
Adi_g022381 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077989 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g49450 UPL3, KAK LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02725 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g14715 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47900 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20762 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene47697.t2 UPL3, KAK,... E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g008108 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: CDS=419-6391 0.07 OrthoFinder output from all 47 species
Cba_g14867 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29745 UPL3, KAK not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.01G061600.1 UPL3, KAK,... E3 ubiquitin ligase *(UPL3) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.02G085400.1 UPL3, KAK,... E3 ubiquitin ligase *(UPL3) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.36 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Dac_g03421 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20263 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.07 OrthoFinder output from all 47 species
SVGDde_g21337 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08697 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g09278 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018731001 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
GSVIVT01024033001 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_07121 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.08 OrthoFinder output from all 47 species
Gb_07122 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
Gb_20276 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.09 OrthoFinder output from all 47 species
Gb_20277 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
Gb_20278 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.07 OrthoFinder output from all 47 species
LOC_Os05g03100.1 UPL4, LOC_Os05g03100 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
Len_g18323 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g19132 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g02474 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10426439g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
MA_10428377g0020 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
MA_10434379g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.09 OrthoFinder output from all 47 species
MA_140610g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
MA_62286g0020 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
MA_884104g0010 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.08 OrthoFinder output from all 47 species
Mp1g24750.1 UPL3, KAK monomeric E3 ubiquitin ligase (HECT) 0.05 OrthoFinder output from all 47 species
Msp_g13943 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13561 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25162 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25807 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g41653 UPL3, KAK not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12252 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17671 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g07024 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01429 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009013 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: CDS=326-6067 0.04 OrthoFinder output from all 47 species
Sam_g29297 No alias E3 ubiquitin ligase *(UPL3) & original description: none 0.06 OrthoFinder output from all 47 species
Smo146155 UPL3, KAK Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc01g111530.3.1 UPL3, KAK, Solyc01g111530 monomeric E3 ubiquitin ligase (HECT) 0.1 OrthoFinder output from all 47 species
Solyc10g055450.2.1 UPL3, KAK, Solyc10g055450 monomeric E3 ubiquitin ligase (HECT) 0.06 OrthoFinder output from all 47 species
Spa_g06979 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17541 UPL3, KAK E3 ubiquitin ligase *(UPL3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02200 UPL3, KAK E3 ubiquiTin ligase *(UPL3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008508_P001 UPL3, KAK, Zm00001e008508 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
Zm00001e013385_P003 UPL3, KAK, Zm00001e013385 monomeric E3 ubiquitin ligase (HECT) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 1528 1871
No external refs found!