AMTR_s00099p00150290 (emb1513,...)


Aliases : emb1513, evm_27.TU.AmTr_v1.0_scaffold00099.137

Description : Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana


Gene families : OG0003363 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003363_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00150290
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Aob_g15603 emb1513 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21794 emb1513 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27883 emb1513 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009259 emb1513 not classified & original description: CDS=14-550 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!