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  5. AMTR_s00099p00130090

AMTR_s00099p00130090 (HVE, TIP120, CAND1,...)


Aliases : HVE, TIP120, CAND1, ATCAND1, ETA2, evm_27.TU.AmTr_v1.0_scaffold00099.116

Description : Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor


Gene families : OG0003255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00130090

Target Alias Description ECC score Gene Family Method Actions
AT2G02560 HVE, TIP120,... cullin-associated and neddylation dissociated 0.02 OrthoFinder output from all 47 species
Adi_g080625 HVE, TIP120,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001330 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.04 OrthoFinder output from all 47 species
Cba_g27198 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Cba_g36152 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Dde_g01757 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g09254 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os02g07120.1 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.04 OrthoFinder output from all 47 species
Len_g10725 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g02857 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Smo165037 HVE, TIP120,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Spa_g15706 HVE, TIP120,... adaptor protein exchange factor *(CAND1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e025157_P002 HVE, TIP120,... adaptor protein exchange factor (CAND1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!