AMTR_s00099p00123290 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.105

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycosylation.AGP beta-1,3-galactosyltransferase

Gene families : OG0000384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00099p00123290
Cluster	HCCA: Cluster_172

Target	Alias	Description	ECC score	Gene Family Method
AT1G22015	DD46	Galactosyltransferase family protein	0.05	OrthoFinder output from all 47 species
AT1G33430	No alias	Galactosyltransferase family protein	0.14	OrthoFinder output from all 47 species
Ala_g01230	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
Aob_g42303	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.03	OrthoFinder output from all 47 species
Aop_g68618	DD46	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Aop_g70197	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.04	OrthoFinder output from all 47 species
Cba_g30929	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
Ceric.21G018200.1	Ceric.21G018200	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g30301	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g44108	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g44964	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g40247	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.09	OrthoFinder output from all 47 species
GSVIVT01037121001	No alias	Cell wall.cell wall proteins.hydroxyproline-rich...	0.05	OrthoFinder output from all 47 species
LOC_Os01g65590.1	LOC_Os01g65590	AGP beta-1,3-galactosyltransferase	0.04	OrthoFinder output from all 47 species
LOC_Os05g35266.1	LOC_Os05g35266	AGP beta-1,3-galactosyltransferase	0.05	OrthoFinder output from all 47 species
Len_g55830	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.06	OrthoFinder output from all 47 species
Msp_g02061	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
Msp_g09475	DD46	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g15577	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.08	OrthoFinder output from all 47 species
Sam_g09585	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.02	OrthoFinder output from all 47 species
Solyc11g042810.2.1	Solyc11g042810	AGP beta-1,3-galactosyltransferase	0.11	OrthoFinder output from all 47 species
Spa_g36496	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g46195	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.07	OrthoFinder output from all 47 species
Tin_g45996	No alias	beta-1,3-galactosyltransferase *(B3GALT) & original...	0.05	OrthoFinder output from all 47 species
Zm00001e012498_P003	Zm00001e012498	AGP beta-1,3-galactosyltransferase	0.02	OrthoFinder output from all 47 species
Zm00001e028632_P001	Zm00001e028632	AGP beta-1,3-galactosyltransferase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006486	protein glycosylation	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008378	galactosyltransferase activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043413	macromolecule glycosylation	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070085	glycosylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002659	Glyco_trans_31	164	361
IPR025298	DUF4094	45	135

External Links

No external refs found!

AMTR_s00099p00123290 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation