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  5. AMTR_s00093p00037120

AMTR_s00093p00037120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00093.2

No description available


Gene families : OG0001232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001232_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00093p00037120
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Als_g16334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0389.g067652 No alias not classified & original description: CDS=131-2617 0.02 OrthoFinder output from all 47 species
Dac_g37584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009119 No alias not classified & original description: CDS=313-2328 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR021480 Zinc_ribbon_12 643 688
No external refs found!