AMTR_s00092p00138880 (MED31,...)

Aliases : MED31, evm_27.TU.AmTr_v1.0_scaffold00092.105

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED31 component

Gene families : OG0006304 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006304_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00092p00138880

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sam_g25952	No alias	component *(MED31) of middle module of MEDIATOR...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0016592	mediator complex	IEA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006665	sphingolipid metabolic process	IEP	HCCA
BP	GO:0006672	ceramide metabolic process	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008831	Mediator_Med31	30	129

External Links

No external refs found!

AMTR_s00092p00138880 (MED31,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation