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Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.30
Description : Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00092p00064890 | |
| Cluster | HCCA: Cluster_78 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00177p00030580 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G50270 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| AT2G40720 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G44880 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g005421 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058156 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g064567 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g066055 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g068892 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g069125 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g088362 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g13651 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g17642 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g10918 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g35882 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36522 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g13814 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26267 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26475 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54764 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g23626 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27844 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g32690 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37332 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene30154.t1 | Aspi01Gene30154 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43851.t1 | Aspi01Gene43851 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g010584 | No alias | not classified & original description: CDS=134-2257 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0016.g014262 | No alias | not classified & original description: CDS=1-4500 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0127.g048709 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2400 | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0245.g060017 | No alias | not classified & original description: CDS=1-2076 | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g05902 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g35114 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67804 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g75132 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g09912 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35670 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g21328 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g47940 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000072001 | No alias | Pentatricopeptide repeat-containing protein At3g05340... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01009977001 | No alias | Pentatricopeptide repeat-containing protein At1g43980,... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01012938001 | SLO1 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01016874001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01017075001 | OTP82 | Pentatricopeptide repeat-containing protein At3g12770... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01023860001 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01033863001 | No alias | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01036975001 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_05982 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_11981 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g08120.1 | OTP81, LOC_Os01g08120 | RNA editing factor (OTP81) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g46230.1 | MEF1, LOC_Os01g46230 | RNA editing factor (MEF1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g07050.1 | LOC_Os02g07050 | Pentatricopeptide repeat-containing protein At4g20770... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g04390.1 | LOC_Os03g04390 | Pentatricopeptide repeat-containing protein At4g35130,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g35650.1 | LOC_Os04g35650 | Pentatricopeptide repeat-containing protein At3g26540... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g41120.1 | LOC_Os04g41120 | Pentatricopeptide repeat-containing protein At4g38010... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g45850.1 | LOC_Os05g45850 | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g27790.1 | REME1, LOC_Os06g27790 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g40860.1 | LOC_Os06g40860 | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g05560.1 | LOC_Os07g05560 | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g20420.1 | LOC_Os07g20420 | Pentatricopeptide repeat-containing protein At3g26782,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g38610.1 | LOC_Os08g38610 | Pentatricopeptide repeat-containing protein At1g26900,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g34720.1 | LOI1, MEF11,... | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g37330.2 | LOI1, MEF11,... | RNA editing factor (MEF11) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g45410.1 | LOC_Os11g45410 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g04760 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g04178 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07019 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07048 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g32796 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g35187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10428421g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
| MA_111990g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| MA_121102g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_122899g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_135424g0010 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
| MA_139163g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| MA_187514g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_210823g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At4g37170... | 0.03 | OrthoFinder output from all 47 species | |
| MA_3462g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
| MA_370961g0010 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_40997g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
| MA_41676g0020 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_733561g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| MA_7379g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| MA_73895g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.05 | OrthoFinder output from all 47 species | |
| MA_74986g0020 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_8210920g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| MA_87646g0010 | No alias | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g07729 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g15576 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23153 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g25014 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g37758 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41100 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g41257 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g46073 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04988 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g25097 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38625 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g40763 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43234 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g03497 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g15704 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16169 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g29968 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06848 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07001 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g14465 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g35833 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53937 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g61794 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g63082 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0157.g023738 | CRR2 | not classified & original description: CDS=3678-5561 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0233.g026492 | No alias | not classified & original description: CDS=48-2072 | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g03099 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12346 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13516 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g15556 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50176 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo107700 | CRR22 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Smo112044 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.04 | OrthoFinder output from all 47 species | |
| Smo130453 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Smo136134 | EMB2261 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
| Smo136241 | EMB2758 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g091610.1.1 | Solyc01g091610 | Pentatricopeptide repeat-containing protein At2g27610... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc02g070710.3.1 | Solyc02g070710 | Pentatricopeptide repeat-containing protein At3g20730... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc03g093630.3.1 | CRR2, Solyc03g093630 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g063300.3.1 | Solyc04g063300 | Pentatricopeptide repeat-containing protein At3g26540... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g074160.3.1 | Solyc04g074160 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g046280.3.1 | Solyc05g046280 | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g009500.1.1 | Solyc06g009500 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g082880.2.1 | Solyc06g082880 | RNA editing factor (MEF13) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g042760.1.1 | Solyc07g042760 | Pentatricopeptide repeat-containing protein At4g31070,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g053520.2.1 | SLO1, Solyc07g053520 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc10g008590.1.1 | Solyc10g008590 | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc11g005970.1.1 | Solyc11g005970 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g065250.1.1 | EMB2744, Solyc11g065250 | Pentatricopeptide repeat-containing protein At5g39680... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g099620.1.1 | Solyc12g099620 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17686 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g26788 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g45044 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50388 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44222 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e001007_P001 | Zm00001e001007 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e001918_P001 | EMB2758, Zm00001e001918 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007597_P001 | Zm00001e007597 | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012607_P002 | LOI1, MEF11,... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023333_P001 | Zm00001e023333 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030831_P001 | Zm00001e030831 | Pentatricopeptide repeat-containing protein At3g20730... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e037600_P001 | Zm00001e037600 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |