1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00092p00059730

AMTR_s00092p00059730 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.26

Description : Secondary metabolism.nitrogen-containing secondary compounds.alkaloids.indole alkaloid synthesis.aromatic L-amino acid decarboxylase


Gene families : OG0003989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003989_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00059730
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00139650 evm_27.TU.AmTr_v1... Secondary metabolism.nitrogen-containing secondary... 0.03 OrthoFinder output from all 47 species
Gb_28002 No alias aromatic L-amino acid decarboxylase 0.01 OrthoFinder output from all 47 species
LOC_Os05g43510.1 LOC_Os05g43510 aromatic L-amino acid decarboxylase 0.07 OrthoFinder output from all 47 species
LOC_Os08g04540.1 LOC_Os08g04540 aromatic L-amino acid decarboxylase 0.05 OrthoFinder output from all 47 species
LOC_Os10g23900.1 LOC_Os10g23900 aromatic L-amino acid decarboxylase 0.04 OrthoFinder output from all 47 species
LOC_Os10g26110.1 LOC_Os10g26110 aromatic L-amino acid decarboxylase 0.03 OrthoFinder output from all 47 species
Pir_g46804 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_30950V3.1 Pp3c4_30950 Pyridoxal phosphate (PLP)-dependent transferases... 0.01 OrthoFinder output from all 47 species
Zm00001e000632_P001 Zm00001e000632 aromatic L-amino acid decarboxylase 0.09 OrthoFinder output from all 47 species
Zm00001e000634_P001 Zm00001e000634 aromatic L-amino acid decarboxylase 0.06 OrthoFinder output from all 47 species
Zm00001e021101_P001 Zm00001e021101 aromatic L-amino acid decarboxylase 0.06 OrthoFinder output from all 47 species
Zm00001e040288_P001 Zm00001e040288 aromatic L-amino acid decarboxylase 0.02 OrthoFinder output from all 47 species
Zm00001e040289_P001 Zm00001e040289 aromatic L-amino acid decarboxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 53 426
No external refs found!