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  5. AMTR_s00092p00029780

AMTR_s00092p00029780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.13

No description available


Gene families : OG0004086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00029780

Target Alias Description ECC score Gene Family Method Actions
AT5G57120 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.06 OrthoFinder output from all 47 species
Cre01.g055400 No alias No description available 0.03 OrthoFinder output from all 47 species
Pnu_g18456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g008330.3.1 Solyc07g008330 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e018124_P001 Zm00001e018124 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR007718 Srp40_C 489 562
No external refs found!