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  5. AMTR_s00091p00092100

AMTR_s00091p00092100 (LAG1 HOMOLOG 2, LOH2,...)


Aliases : LAG1 HOMOLOG 2, LOH2, evm_27.TU.AmTr_v1.0_scaffold00091.35

Description : Lipid metabolism.sphingolipid metabolism.ceramide synthase


Gene families : OG0001214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00091p00092100
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT3G19260 LAG1 HOMOLOG 2, LOH2 LAG1 homologue 2 0.04 OrthoFinder output from all 47 species
Aspi01Gene03030.t1 LAG13, Aspi01Gene03030 ceramide synthase & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.63 LAG1 HOMOLOG 2, LOH2 Lipid metabolism.sphingolipid metabolism.ceramide synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR006634 TLC-dom 59 256
No external refs found!