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Aliases : evm_27.TU.AmTr_v1.0_scaffold00091.17
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL19 component
Gene families : OG0001435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001435_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G02780 | emb2386 | Ribosomal protein L19e family protein | 0.1 | OrthoFinder output from all 47 species | |
| AT3G16780 | No alias | Ribosomal protein L19e family protein | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g06873 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g08119 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06897 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03394 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g14682 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene39086.t1 | emb2386, Aspi01Gene39086 | component *(eL19) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene61028.t1 | Aspi01Gene61028 | component *(eL19) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g009570 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g12572 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g12573 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G087100.1 | Ceric.07G087100 | component *(eL19) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.17G056200.1 | Ceric.17G056200 | component *(eL19) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021181.1 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Cre02.g075700 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g04507 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g35194 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g41239 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08169 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01028052001 | emb2386 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035096001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_23171 | emb2386 | component RPL19 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g21940.1 | emb2386, LOC_Os03g21940 | component RPL19 of LSU proteome component | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os03g38260.1 | LOC_Os03g38260 | component RPL19 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
| MA_1839g0010 | emb2386 | component RPL19 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| MA_22977g0010 | emb2386 | component RPL19 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g09050.1 | No alias | component RPL19 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Nbi_g05153 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g44205 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c15_5130V3.1 | Pp3c15_5130 | Ribosomal protein L19e family protein | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c16_410V3.1 | Pp3c16_410 | Ribosomal protein L19e family protein | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c21_11230V3.1 | Pp3c21_11230 | Ribosomal protein L19e family protein | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c22_9980V3.1 | Pp3c22_9980 | Ribosomal protein L19e family protein | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c9_14720V3.1 | Pp3c9_14720 | Ribosomal protein L19e family protein | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g00487 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01823 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g28399 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005282 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25834 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g38378 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Smo179747 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Smo271656 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g009210.4.1 | emb2386, Solyc06g009210 | component RPL19 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Solyc09g075430.3.1 | Solyc09g075430 | component RPL19 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11535 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g11536 | No alias | component *(eL19) of large ribosomal-subunit (LSU)... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e013683_P001 | emb2386, Zm00001e013683 | component RPL19 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020524_P001 | emb2386, Zm00001e020524 | component RPL19 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e025202_P001 | Zm00001e025202 | component RPL19 of LSU proteome component | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e036280_P001 | Zm00001e036280 | component RPL19 of LSU proteome component | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| CC | GO:0005853 | eukaryotic translation elongation factor 1 complex | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |