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  5. AMTR_s00089p00089760

AMTR_s00089p00089760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00089.47

No description available


Gene families : OG0003838 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003838_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00089p00089760
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Adi_g021751 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g110705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G051900.1 Ceric.25G051900 not classified & original description: pacid=50594529... 0.03 OrthoFinder output from all 47 species
Cre04.g222300 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g04870 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014608001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01029743001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_16843 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_73776g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_82814g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g20260.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g16011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g083200.2.1 Solyc10g083200 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g17379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e030300_P002 Zm00001e030300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000061 Surp 121 168
No external refs found!