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  5. AMTR_s00088p00046280

AMTR_s00088p00046280 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.24

Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana


Gene families : OG0012352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012352_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00046280
Cluster HCCA: Cluster_78


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 519 567
IPR002885 Pentatricopeptide_repeat 354 383
IPR002885 Pentatricopeptide_repeat 110 132
IPR002885 Pentatricopeptide_repeat 389 419
IPR002885 Pentatricopeptide_repeat 234 263
IPR002885 Pentatricopeptide_repeat 48 78
IPR002885 Pentatricopeptide_repeat 493 518
IPR002885 Pentatricopeptide_repeat 420 447
IPR002885 Pentatricopeptide_repeat 330 351
IPR002885 Pentatricopeptide_repeat 203 231
IPR002885 Pentatricopeptide_repeat 265 294
IPR002885 Pentatricopeptide_repeat 79 105
IPR002885 Pentatricopeptide_repeat 172 200
IPR002885 Pentatricopeptide_repeat 297 324
IPR002885 Pentatricopeptide_repeat 24 45
IPR002885 Pentatricopeptide_repeat 143 170
No external refs found!