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  5. AMTR_s00087p00025210

AMTR_s00087p00025210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00087.5

No description available


Gene families : OG0007781 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007781_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00087p00025210
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Aev_g42674 No alias lysine decarboxylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0209.g058040 No alias lysine decarboxylase & original description: CDS=1-1554 0.02 OrthoFinder output from all 47 species
MA_51782g0010 No alias lysine decarboxylase 0.03 OrthoFinder output from all 47 species
Mp2g19760.1 No alias lysine decarboxylase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000310 Orn/Lys/Arg_deCO2ase_major_dom 84 376
IPR008286 Prn/Lys/Arg_de-COase_C 490 552
No external refs found!