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  5. AMTR_s00086p00056140

AMTR_s00086p00056140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00086.22

No description available


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00086p00056140
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT1G58370 ATXYN1, RXF12 glycosyl hydrolase family 10 protein /... 0.03 OrthoFinder output from all 47 species
AT2G14690 No alias Glycosyl hydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G08160 No alias glycosyl hydrolase family 10 protein /... 0.03 OrthoFinder output from all 47 species
AT4G33810 No alias Glycosyl hydrolase superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G33830 No alias Glycosyl hydrolase family 10 protein 0.03 OrthoFinder output from all 47 species
AT4G33840 No alias Glycosyl hydrolase family 10 protein 0.03 OrthoFinder output from all 47 species
AT4G33860 No alias Glycosyl hydrolase family 10 protein 0.02 OrthoFinder output from all 47 species
Ala_g25978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17062 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.30G036100.1 Ceric.30G036100 not classified & original description: pacid=50608372... 0.03 OrthoFinder output from all 47 species
Ehy_g26905 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024049001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01037825001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01037832001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01037833001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_02219 No alias no description available(sp|q84wt5|xyn5l_arath : 355.0) 0.02 OrthoFinder output from all 47 species
LOC_Os01g04290.1 LOC_Os01g04290 endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
LOC_Os01g04300.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.06 OrthoFinder output from all 47 species
LOC_Os03g10478.1 LOC_Os03g10478 no description available(sp|q84wt5|xyn5l_arath : 394.0) 0.02 OrthoFinder output from all 47 species
LOC_Os03g14010.1 LOC_Os03g14010 no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g47010.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.05 OrthoFinder output from all 47 species
LOC_Os05g23350.1 LOC_Os05g23350 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os05g25560.1 LOC_Os05g25560 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os07g27320.1 LOC_Os07g27320 endo-beta-1,4-xylanase 0.01 OrthoFinder output from all 47 species
LOC_Os10g21100.1 LOC_Os10g21100 no description available(sp|a0a1p8b8f8|xyn5_arath : 358.0) 0.03 OrthoFinder output from all 47 species
LOC_Os10g21110.1 LOC_Os10g21110 no description available(sp|q680b7|xyn4_arath : 358.0) 0.02 OrthoFinder output from all 47 species
Mp6g05510.1 ATXYN1, RXF12 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
Sam_g09327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g106990.2.1 Solyc01g106990 no description available(sp|q84wt5|xyn5l_arath : 338.0) 0.03 OrthoFinder output from all 47 species
Solyc05g051260.3.1 Solyc05g051260 no description available(sp|q84wt5|xyn5l_arath : 344.0) 0.03 OrthoFinder output from all 47 species
Solyc11g043160.2.1 Solyc11g043160 no description available(sp|q84wt5|xyn5l_arath : 375.0) 0.01 OrthoFinder output from all 47 species
Zm00001e000757_P001 Zm00001e000757 no description available(sp|q84wt5|xyn5l_arath : 397.0) 0.02 OrthoFinder output from all 47 species
Zm00001e001013_P003 Zm00001e001013 no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.02 OrthoFinder output from all 47 species
Zm00001e016992_P001 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.06 OrthoFinder output from all 47 species
Zm00001e038772_P001 Zm00001e038772 no description available(sp|q84wt5|xyn5l_arath : 392.0) 0.03 OrthoFinder output from all 47 species
Zm00001e038773_P006 Zm00001e038773 no description available(sp|q84wt5|xyn5l_arath : 388.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR001000 GH10_dom 152 411
No external refs found!