1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00086p00040290

AMTR_s00086p00040290 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00086.18

Description : BTB/POZ domain-containing protein At3g49900 OS=Arabidopsis thaliana


Gene families : OG0016030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00086p00040290
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AT3G49900 No alias Phototropic-responsive NPH3 family protein 0.07 OrthoFinder output from all 47 species
GSVIVT01000112001 No alias BTB/POZ domain-containing protein At3g49900... 0.02 OrthoFinder output from all 47 species
LOC_Os07g39850.1 LOC_Os07g39850 BTB/POZ domain-containing protein At3g49900... 0.03 OrthoFinder output from all 47 species
Solyc02g092420.4.1 Solyc02g092420 BTB/POZ domain-containing protein At3g49900... 0.03 OrthoFinder output from all 47 species
Zm00001e035413_P001 Zm00001e035413 BTB/POZ domain-containing protein At3g49900... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 210 274
No external refs found!