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  5. AMTR_s00084p00090740

AMTR_s00084p00090740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00084.26

Description : Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-1 motor protein


Gene families : OG0000122 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00084p00090740
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Ala_g12863 No alias Kinesin-5-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06209.t1 Aspi01Gene06209 Kinesin-7-type motor protein & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000145.4 POK2 Kinesin-like protein KIN-12D OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Len_g57402 POK2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g17810.1 No alias Kinesin-like protein KIN-7I OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Msp_g32542 PAKRP1L, KINESIN-12B Kinesin-12-type motor protein & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_18000V3.1 FRA1, Pp3c4_18000 P-loop containing nucleoside triphosphate hydrolases... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005875 microtubule associated complex IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001752 Kinesin_motor_dom 9 326
No external refs found!