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  5. AMTR_s00081p00016210

AMTR_s00081p00016210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00081.2

No description available


Gene families : OG0001124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00081p00016210

Target Alias Description ECC score Gene Family Method Actions
Adi_g012581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0802.g087549 No alias not classified & original description: CDS=28-1134 0.04 OrthoFinder output from all 47 species
Cba_g11440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010377 No alias not classified & original description: CDS=1-1434 0.03 OrthoFinder output from all 47 species
Sam_g36308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo96486 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g104500.2.1 Solyc01g104500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g006700.3.1 Solyc12g006700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g10644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020682_P002 Zm00001e020682 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012866 DUF1644 48 238
No external refs found!