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  5. AMTR_s00080p00165150

AMTR_s00080p00165150 (IRX9,...)


Aliases : IRX9, evm_27.TU.AmTr_v1.0_scaffold00080.84

Description : Cell wall.hemicellulose.xylan.synthesis.xylosyltransferase activities.xylosyltransferase (IRX9)


Gene families : OG0003113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00080p00165150

Target Alias Description ECC score Gene Family Method Actions
AT2G37090 IRX9 Nucleotide-diphospho-sugar transferases superfamily protein 0.09 OrthoFinder output from all 47 species
Ala_g02011 IRX9-L, I9H EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07820 IRX9-L, I9H EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G052200.1 IRX9-L, I9H,... EC_2.4 glycosyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Ehy_g28807 IRX9-L, I9H EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025636001 IRX9 Cell... 0.07 OrthoFinder output from all 47 species
LOC_Os03g17850.1 IRX9, LOC_Os03g17850 xylosyltransferase (IRX9) 0.04 OrthoFinder output from all 47 species
LOC_Os05g03174.2 IRX9, LOC_Os05g03174 xylosyltransferase (IRX9) 0.05 OrthoFinder output from all 47 species
MA_42440g0010 IRX9-L, I9H xylosyltransferase (IRX9) 0.04 OrthoFinder output from all 47 species
Msp_g06720 IRX9-L, I9H EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20097 IRX9-L, I9H EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Smo78265 IRX9-L, I9H Cell... 0.02 OrthoFinder output from all 47 species
Spa_g49296 IRX9-L, I9H EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49297 IRX9-L, I9H EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001298_P002 IRX9, Zm00001e001298 xylosyltransferase (IRX9) 0.03 OrthoFinder output from all 47 species
Zm00001e020178_P001 IRX9-L, I9H,... xylosyltransferase (IRX9) 0.05 OrthoFinder output from all 47 species
Zm00001e027584_P001 IRX9, Zm00001e027584 xylosyltransferase (IRX9) 0.05 OrthoFinder output from all 47 species
Zm00001e038428_P001 IRX9, Zm00001e038428 xylosyltransferase (IRX9) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005027 Glyco_trans_43 109 313
No external refs found!