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  5. AMTR_s00079p00035080

AMTR_s00079p00035080 (ATXYL1, XYL1, TRG1,...)


Aliases : ATXYL1, XYL1, TRG1, evm_27.TU.AmTr_v1.0_scaffold00079.8

Description : Cell wall.hemicellulose.xyloglucan.modification and degradation.1,6-alpha-xylosidase


Gene families : OG0001972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001972_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00079p00035080

Target Alias Description ECC score Gene Family Method Actions
Als_g29422 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G047500.1 ATXYL1, XYL1,... EC_3.2 glycosylase & original description:... 0.02 OrthoFinder output from all 47 species
Gb_01073 ATXYL1, XYL1, TRG1 1,6-alpha-xylosidase 0.02 OrthoFinder output from all 47 species
LOC_Os01g03950.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.02 OrthoFinder output from all 47 species
LOC_Os06g46340.1 LOC_Os06g46340 Probable alpha-glucosidase Os06g0675700 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Sam_g36202 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000322 Glyco_hydro_31 8 466
No external refs found!