AMTR_s00079p00020610 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.2

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00079p00020610

Target	Alias	Description	ECC score	Gene Family Method
AT5G47230	ERF5, ATERF-5, ATERF5	ethylene responsive element binding factor 5	0.04	OrthoFinder output from all 47 species
Aev_g09266	DEAR2	subgroup ERF-II transcription factor *(ERF19/20) &...	0.03	OrthoFinder output from all 47 species
Aev_g28707	ORA47	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g42330	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g07749	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ala_g23255	Rap2.6L	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0190.g056913	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original...	0.04	OrthoFinder output from all 47 species
Cba_g11441	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.04G057600.1	RAP2.2, Ceric.04G057600	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Dac_g33437	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dde_g22327	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Dde_g28204	DREB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g11203	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g11833	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Ehy_g12115	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
MA_115502g0010	No alias	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Mp5g11100.1	ATERF4, RAP2.5,...	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Nbi_g00522	No alias	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Pir_g24895	No alias	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g37433	ATERF13, ERF13, EREBP	subgroup ERF-IX transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g40777	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g47622	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g22604	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Pp3c11_13860V3.1	ATERF-9, ERF9,...	ethylene responsive element binding factor 4	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006108	No alias	not classified & original description: CDS=1-567	0.02	OrthoFinder output from all 47 species
Sam_g25987	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e016064_P001	RAP2.2, Zm00001e016064	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e019159_P001	ERF110, Zm00001e019159	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	116	167

External Links

No external refs found!

AMTR_s00079p00020610 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation