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  5. AMTR_s00078p00109260

AMTR_s00078p00109260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.82

No description available


Gene families : OG0004902 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004902_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00109260

Target Alias Description ECC score Gene Family Method Actions
Als_g12087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008051001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_23470 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g10765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_128292g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_26994g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g47807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g36512 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!