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  5. AMTR_s00078p00084050

AMTR_s00078p00084050 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.57

No description available


Gene families : OG0004779 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00084050

Target Alias Description ECC score Gene Family Method Actions
AT1G74730 No alias Protein of unknown function (DUF1118) 0.09 OrthoFinder output from all 47 species
Adi_g039949 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Aev_g00516 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Ala_g17180 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Aob_g05587 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Aop_g12282 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Azfi_s0157.g053809 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Cba_g25943 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Dac_g01953 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Dcu_g06024 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Ehy_g17265 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
GSVIVT01008063001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g00985 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
MA_10433575g0010 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Mp3g09060.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g04786 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Msp_g04787 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Nbi_g15112 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ore_g05228 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Ore_g05229 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Pir_g20319 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Solyc03g113240.3.1 Solyc03g113240 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g04757 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Tin_g32284 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Zm00001e020546_P001 Zm00001e020546 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005960 glycine cleavage complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR009500 DUF1118 82 197
No external refs found!