- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.23
Description : 26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana
Gene families : OG0000788 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000788_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00078p00048310 | |
| Cluster | HCCA: Cluster_2 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00113p00022880 | HSP21,... | Small heat shock protein, chloroplastic OS=Petunia hybrida | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g44644 | HSP21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36861 | HSP21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08224 | HSP21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08370 | HSP21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_13755 | HSP21 | Heat shock protein 21, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g52150.1 | LOC_Os02g52150 | class-M-I small heat-shock-responsive protein | 0.03 | OrthoFinder output from all 47 species | |
| Len_g28316 | HSP21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_3081g0010 | No alias | class-M-I small heat-shock-responsive protein | 0.04 | OrthoFinder output from all 47 species | |
| MA_605776g0010 | HSP21 | Small heat shock protein, chloroplastic OS=Petunia... | 0.06 | OrthoFinder output from all 47 species | |
| Mp6g20700.1 | HSP21 | Heat shock protein 21, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g082420.3.1 | HSP21, Solyc03g082420 | class-P small heat-shock-responsive protein | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g014280.4.1 | HSP21, Solyc05g014280 | Small heat shock protein, chloroplastic OS=Pisum sativum... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006950 | response to stress | IEP | HCCA |
| MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002068 | A-crystallin/Hsp20_dom | 44 | 137 |
| No external refs found! |