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  5. AMTR_s00077p00185050

AMTR_s00077p00185050 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.213

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL17 component


Gene families : OG0002243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002243_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00077p00185050
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AT3G54210 No alias Ribosomal protein L17 family protein 0.01 OrthoFinder output from all 47 species
Als_g32904 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Aop_g05075 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Azfi_s0132.g049286 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Dac_g01223 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
GSVIVT01037929001 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Gb_36007 No alias component psRPL17 of large ribosomal subunit proteome 0.01 OrthoFinder output from all 47 species
Lfl_g00441 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Pnu_g23868 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Solyc06g082750.3.1 Solyc06g082750 component psRPL17 of large ribosomal subunit proteome 0.01 OrthoFinder output from all 47 species
Solyc06g082760.4.1 Solyc06g082760 component psRPL17 of large ribosomal subunit proteome 0.01 OrthoFinder output from all 47 species
Tin_g03061 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000456 Ribosomal_L17 104 200
No external refs found!