Coexpression cluster: Cluster_64 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006352 DNA-templated transcription initiation 3.81% (4/105) 5.17 5e-06 0.001314
GO:0044271 cellular nitrogen compound biosynthetic process 8.57% (9/105) 2.49 3.4e-05 0.004932
GO:0005672 transcription factor TFIIA complex 1.9% (2/105) 6.7 0.000145 0.013996
GO:0034641 cellular nitrogen compound metabolic process 10.48% (11/105) 1.75 0.000433 0.025055
GO:0009059 macromolecule biosynthetic process 6.67% (7/105) 2.32 0.000524 0.025259
GO:0032774 RNA biosynthetic process 3.81% (4/105) 3.34 0.000681 0.028108
GO:0006367 transcription initiation at RNA polymerase II promoter 1.9% (2/105) 6.02 0.000404 0.02917
GO:0090575 RNA polymerase II transcription regulator complex 1.9% (2/105) 5.44 0.000942 0.030254
GO:0044249 cellular biosynthetic process 8.57% (9/105) 1.85 0.000896 0.032376
GO:1901576 organic substance biosynthetic process 8.57% (9/105) 1.75 0.001457 0.035078
GO:0018130 heterocycle biosynthetic process 4.76% (5/105) 2.62 0.001384 0.036361
GO:0019438 aromatic compound biosynthetic process 4.76% (5/105) 2.64 0.001272 0.036771
GO:0005667 transcription regulator complex 1.9% (2/105) 4.94 0.001917 0.042621
GO:0009058 biosynthetic process 8.57% (9/105) 1.54 0.00386 0.042906
GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor 0.95% (1/105) 8.02 0.003844 0.04444
GO:0006012 galactose metabolic process 0.95% (1/105) 8.02 0.003844 0.04444
GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity 0.95% (1/105) 8.02 0.003844 0.04444
GO:0070569 uridylyltransferase activity 0.95% (1/105) 8.02 0.003844 0.04444
GO:0046938 phytochelatin biosynthetic process 0.95% (1/105) 8.02 0.003844 0.04444
GO:0046937 phytochelatin metabolic process 0.95% (1/105) 8.02 0.003844 0.04444
GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity 0.95% (1/105) 8.02 0.003844 0.04444
GO:0051202 phytochromobilin metabolic process 0.95% (1/105) 8.02 0.003844 0.04444
GO:0010024 phytochromobilin biosynthetic process 0.95% (1/105) 8.02 0.003844 0.04444
GO:0050897 cobalt ion binding 0.95% (1/105) 8.02 0.003844 0.04444
GO:0016192 vesicle-mediated transport 2.86% (3/105) 3.22 0.004197 0.044928
GO:1901362 organic cyclic compound biosynthetic process 4.76% (5/105) 2.46 0.002212 0.045654
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_36 0.017 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_176 0.017 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_299 0.015 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_396 0.015 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_3 0.023 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_41 0.015 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_47 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_74 0.017 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_74 0.016 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_91 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_137 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_35 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_85 0.019 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_114 0.015 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_12 0.019 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_19 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_30 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_52 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_82 0.019 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_241 0.019 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_12 0.021 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_42 0.018 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_75 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_17 0.017 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_1 0.021 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_28 0.017 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_154 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_23 0.019 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_60 0.015 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_131 0.02 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_22 0.019 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_68 0.021 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_34 0.016 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_68 0.02 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_150 0.025 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_58 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_65 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_142 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_241 0.016 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_256 0.021 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_124 0.022 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_223 0.015 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_10 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_41 0.016 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_121 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_24 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_231 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_146 0.024 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_13 0.019 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_40 0.028 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_61 0.022 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_21 0.025 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_42 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_47 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_74 0.023 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_133 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_152 0.021 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_13 0.017 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_34 0.02 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_6 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_56 0.019 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_92 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_110 0.02 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_23 0.018 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_68 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_124 0.02 OrthoFinder output from all 47 species Compare
Sequences (105) (download table)

InterPro Domains

GO Terms

Family Terms