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  5. AMTR_s00077p00183470

AMTR_s00077p00183470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.210

No description available


Gene families : OG0001085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00183470
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT3G14170 No alias Plant protein of unknown function (DUF936) 0.03 OrthoFinder output from all 47 species
AT4G13370 No alias Plant protein of unknown function (DUF936) 0.17 OrthoFinder output from all 47 species
Ala_g32630 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Aop_g11292 No alias regulatory protein *(CORD) of cortical microtubule... 0.19 OrthoFinder output from all 47 species
Aop_g14235 No alias regulatory protein *(CORD) of cortical microtubule... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00569.t1 Aspi01Gene00569 regulatory protein *(CORD) of cortical microtubule... 0.07 OrthoFinder output from all 47 species
Azfi_s0077.g038058 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Ceric.02G008100.1 Ceric.02G008100 regulatory protein *(CORD) of cortical microtubule... 0.15 OrthoFinder output from all 47 species
Ceric.11G037300.1 Ceric.11G037300 regulatory protein *(CORD) of cortical microtubule... 0.05 OrthoFinder output from all 47 species
Dcu_g07734 No alias regulatory protein *(CORD) of cortical microtubule... 0.02 OrthoFinder output from all 47 species
GSVIVT01015437001 No alias No description available 0.23 OrthoFinder output from all 47 species
Gb_38624 No alias regulatory protein (CORD) of cortical microtubule organisation 0.11 OrthoFinder output from all 47 species
LOC_Os11g02740.1 LOC_Os11g02740 regulatory protein (CORD) of cortical microtubule organisation 0.16 OrthoFinder output from all 47 species
LOC_Os12g02710.1 LOC_Os12g02710 regulatory protein (CORD) of cortical microtubule organisation 0.17 OrthoFinder output from all 47 species
Len_g03904 No alias regulatory protein *(CORD) of cortical microtubule... 0.05 OrthoFinder output from all 47 species
Len_g11431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39733 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
MA_8827g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.12 OrthoFinder output from all 47 species
MA_88653g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.03 OrthoFinder output from all 47 species
Msp_g14571 No alias regulatory protein *(CORD) of cortical microtubule... 0.08 OrthoFinder output from all 47 species
Msp_g15670 No alias regulatory protein *(CORD) of cortical microtubule... 0.12 OrthoFinder output from all 47 species
Nbi_g01423 No alias regulatory protein *(CORD) of cortical microtubule... 0.02 OrthoFinder output from all 47 species
Nbi_g10387 No alias regulatory protein *(CORD) of cortical microtubule... 0.14 OrthoFinder output from all 47 species
Ppi_g12415 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001426 No alias regulatory protein *(CORD) of cortical microtubule... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020683 No alias regulatory protein *(CORD) of cortical microtubule... 0.07 OrthoFinder output from all 47 species
Solyc03g122080.3.1 Solyc03g122080 regulatory protein (CORD) of cortical microtubule organisation 0.04 OrthoFinder output from all 47 species
Solyc12g007020.2.1 Solyc12g007020 regulatory protein (CORD) of cortical microtubule organisation 0.17 OrthoFinder output from all 47 species
Spa_g12628 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Spa_g44766 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g47771 No alias regulatory protein *(CORD) of cortical microtubule... 0.09 OrthoFinder output from all 47 species
Tin_g08819 No alias regulatory protein *(CORD) of cortical microtubule... 0.08 OrthoFinder output from all 47 species
Tin_g44365 No alias regulatory protein *(CORD) of cortical microtubule... 0.11 OrthoFinder output from all 47 species
Zm00001e024007_P001 Zm00001e024007 regulatory protein (CORD) of cortical microtubule organisation 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010341 DUF936_pln 318 583
IPR010341 DUF936_pln 4 316
No external refs found!