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  5. AMTR_s00077p00181380

AMTR_s00077p00181380 (MED33A, RFR1,...)


Aliases : MED33A, RFR1, evm_27.TU.AmTr_v1.0_scaffold00077.205

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED5/MED24/MED33 component


Gene families : OG0004136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00181380

Target Alias Description ECC score Gene Family Method Actions
Ceric.10G044900.1 MED33A, RFR1,... component *(MED5/MED24/MED33) of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
GSVIVT01011094001 MED33A, RFR1 RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
MA_10436194g0030 MED33A, RFR1 component MED5/MED24/MED33 of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ore_g35586 MED33A, RFR1 component *(MED5/MED24/MED33) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!