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  5. AMTR_s00077p00135610

AMTR_s00077p00135610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.132

Description : Probable E3 ubiquitin-protein ligase BAH1-like OS=Arabidopsis thaliana


Gene families : OG0001271 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001271_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00077p00135610

Target Alias Description ECC score Gene Family Method Actions
Adi_g010237 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g06597 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09304 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38307 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30061 NLA, BAH1 E3 ubiquitin ligase *(NLA) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR004331 SPX_dom 1 96
IPR004331 SPX_dom 119 160
No external refs found!