AMTR_s00075p00150250 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00075.44

Description : ABC transporter G family member 8 OS=Arabidopsis thaliana

Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00075p00150250
Cluster	HCCA: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method
AT5G52860	No alias	ABC-2 type transporter family protein	0.05	OrthoFinder output from all 47 species
Ala_g23786	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14907	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene05499.t1	Aspi01Gene05499	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene07578.t1	Aspi01Gene07578	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0120.g046757	No alias	subfamily ABCG transporter & original description: CDS=1-2250	0.04	OrthoFinder output from all 47 species
Cba_g06245	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07276	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g34793	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g38683	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g04073	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01022346001	No alias	ABC transporter G family member 5 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01028809001	No alias	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Gb_19188	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Gb_24085	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os03g17350.1	LOC_Os03g17350	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os06g30730.1	LOC_Os06g30730	subfamily ABCG transporter	0.06	OrthoFinder output from all 47 species
MA_103974g0010	No alias	ABC transporter G family member 5 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_529254g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp2g07990.1	No alias	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Mp3g16700.1	No alias	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Msp_g13417	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g11905	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g37386	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g40770	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g26296	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g32502	No alias	ABC-G-type lipid transporter *(STR) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c9_18880V3.1	Pp3c9_18880	ABC-2 type transporter family protein	0.01	OrthoFinder output from all 47 species
Ppi_g31857	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006110	No alias	subfamily ABCG transporter & original description: CDS=1-2232	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023718	No alias	not classified & original description: CDS=1-2514	0.03	OrthoFinder output from all 47 species
Solyc03g007690.1.1	Solyc03g007690	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Solyc03g113690.1.1	Solyc03g113690	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Spa_g29782	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001269_P001	Zm00001e001269	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Zm00001e031556_P001	Zm00001e031556	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e036158_P002	Zm00001e036158	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
MF	GO:0070001	aspartic-type peptidase activity	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	324	533
IPR003439	ABC_transporter-like_ATP-bd	82	203

External Links

No external refs found!

AMTR_s00075p00150250 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation