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  5. AMTR_s00074p00190580

AMTR_s00074p00190580 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00074.113

Description : Protein modification.protein folding and quality control.protein folding catalyst activities.TF nascent polypeptide chaperone


Gene families : OG0005980 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005980_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00074p00190580

Target Alias Description ECC score Gene Family Method Actions
AT5G55220 No alias trigger factor type chaperone family protein 0.04 OrthoFinder output from all 47 species
Aev_g04634 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08766 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66835.t1 Aspi01Gene66835 nascent polypeptide chaperone *(TIG) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11734 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49269 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03701 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037722001 No alias Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
LOC_Os06g20320.1 LOC_Os06g20320 nascent polypeptide chaperone (TF) 0.02 OrthoFinder output from all 47 species
MA_10429151g0010 No alias nascent polypeptide chaperone (TF) 0.04 OrthoFinder output from all 47 species
Nbi_g11562 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013451 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Sam_g09346 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g064950.3.1 Solyc07g064950 nascent polypeptide chaperone (TF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR008881 Trigger_fac_ribosome-bd_bac 46 183
IPR008880 Trigger_fac_C 319 477
No external refs found!