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Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.196
Description : Prolycopene isomerase, chloroplastic OS=Daucus carota
Gene families : OG0002889 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002889_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G57770 | No alias | FAD/NAD(P)-binding oxidoreductase family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g052232 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g49491 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g06469 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05632 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07926 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g00730 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08553 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g27219 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.23G052400.1 | Ceric.23G052400 | not classified & original description: pacid=50610225... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001258.10 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020723.8 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Cre09.g407200 | No alias | Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum | 0.03 | OrthoFinder output from all 47 species | |
| Cre16.g674950 | No alias | Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g23383 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g10069 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g14193 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g06829 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g15650 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_39487 | No alias | Prolycopene isomerase, chloroplastic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g62510.1 | LOC_Os03g62510 | Prolycopene isomerase, chloroplastic OS=Daucus carota... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g21505 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05426 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10428345g0020 | No alias | Prolycopene isomerase, chloroplastic OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| MA_10428660g0010 | No alias | Prolycopene isomerase 1, chloroplastic OS=Oncidium... | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g48604 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g08605 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g59265 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10834 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g62907 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0052.g014061 | No alias | not classified & original description: CDS=115-1746 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0128.g021866 | No alias | not classified & original description: CDS=168-1886 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0204.g025671 | No alias | not classified & original description: CDS=41-1720 | 0.05 | OrthoFinder output from all 47 species | |
| Smo229587 | No alias | Prolycopene isomerase 1, chloroplastic OS=Oncidium... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g010180.4.1 | Solyc05g010180 | Prolycopene isomerase, chloroplastic OS=Daucus carota... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07332 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23774 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e011669_P002 | Zm00001e011669 | Prolycopene isomerase, chloroplastic OS=Daucus carota... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
| BP | GO:0006772 | thiamine metabolic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0009228 | thiamine biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034308 | primary alcohol metabolic process | IEP | HCCA |
| BP | GO:0034309 | primary alcohol biosynthetic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0051205 | protein insertion into membrane | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |